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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904263.1_cds_XP_016454407.1_48436
CDS Infomation

[gene=LOC107778634] [db_xref=GeneID:107778634] [protein=E3 ubiquitin-protein ligase RGLG2-like] [partial=5'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016454407.1] [location=complement(join(26108..26191,26467..26523,26672..26798,27361..27488,27575..27680,28416..28495,28627..28724,28838..28951,29087..29227,29621..29705,31218..>31274))] [gbkey=CDS]
Sequence

AAGAAGAAGAAGAGCAAGTACTACTATATTCCTGATAATTTCTCATCCCTTGATCAGGTC
ACTATAGCCCTGAGAGAATCAGGATTGGAGTCGTCAAATTTAATTATCGGGATAGATTTC
ACGAAAAGTAATGAATGGACAGGTAAAGTTTCATTCAACAACAGGAGCTTGCATGCAATA
GGCGATTCACTCAATCCATATGAGAAAGCCATATCTATCATTGGAAAGACATTGTCTGCA
TTCGATGAAGACAATCTAATTCCTTGTTTCGGGTTTGGTGATGTGACTACGCATGATCAA
GACGTGTTTAGTTTTCATAGTGATCACTCTCCCTGCCACGGCTTTGAAGAAGTCCTTGCT
TGCTACAGGAAAATAGTTCCAAATCTGCAATTATCTGGGCCGACATCTTATGGGCCAGTA
GTAGATGCTGCAGTAGATATAGTGGAGAAAACAGGTGGACAATACCATGTCTTAGTTATC
ATCGCTGATGGCCAGGTTACAAGGAGTGTCAATACCAATGATTCAGAACTCAGCCCACAA
GAAGAGAAGACAATTAGTTCTATCGTCACCGCGAGCATGTATCCTCTCTCTATTGTTCTT
GTTGGAGTTGGTGATGGACCTTGGGAAGACATGCAAAAATTTGATGACCGGATTCCTGCG
CGTGAATTTGATAATTTTCAGTTTGTGAATTTTACCGGTGTCATGTCAAAACATACAACT
GATTCTGCAAAGGAATCTGCATTTGCTCTTGCTGCACTTATGGAGATTCCTATCCAATAT
AAAGCAGCTCGAGAACTTGGTCTGCTGGGGAAAAGAACATCTAAGGCGAAGAAAGTAGTT
CCAAGACGACCACCAGTGTCATACCGTCGCCCTATGGCAATCCCAACTCAAGATCAAAGC
AGTCTTTCAGGATCCGCGCAAGATGAACATAGCCAAGTTTGCCCAGTTTGTCTAACTGGT
ACTAAGGACATGGCTTTTGGTTGTGGACATATGACTTGCAGAGAATGTGGTCCAAGATTG
TCAGATTGTCCCATTTGTCGTCGACGGATTACTAGTCGCATCCGGTTATACACTTAA

Peptide Sequence

PEP ID

XP_016454407.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Nicotiana tabacum]
Sequence

MGNIFSFPFRKQSSSSSSRNSSNNNTSTSFSSISKSRNRLLSSFSPFESSVNDNNNSSIP
VKCSSSDSGSSDGKMASTNSKKETEQMTQNKKKKSKYYYIPDNFSSLDQVTIALRESGLE
SSNLIIGIDFTKSNEWTGKVSFNNRSLHAIGDSLNPYEKAISIIGKTLSAFDEDNLIPCF
GFGDVTTHDQDVFSFHSDHSPCHGFEEVLACYRKIVPNLQLSGPTSYGPVVDAAVDIVEK
TGGQYHVLVIIADGQVTRSVNTNDSELSPQEEKTISSIVTASMYPLSIVLVGVGDGPWED
MQKFDDRIPAREFDNFQFVNFTGVMSKHTTDSAKESAFALAALMEIPIQYKAARELGLLG
KRTSKAKKVVPRRPPVSYRRPMAIPTQDQSSLSGSAQDEHSQVCPVCLTGTKDMAFGCGH
MTCRECGPRLSDCPICRRRITSRIRLYT

Transcript Sequence

Gene sequence data has not been registered.